Solution characterization and fabrication of hydrogel microstructures on an optical fiber

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dc.contributor.advisorShear, Jason B.
dc.contributor.committeeMemberBrodbelt, Jennifer
dc.contributor.committeeMemberStevenson, Keith
dc.contributor.committeeMemberWebb, Lauren
dc.creatorMyers, Allison Paige
dc.date.accessioned2019-04-10T21:20:36Z
dc.date.available2019-04-10T21:20:36Z
dc.date.created2018-12
dc.date.issued2018-12-04
dc.date.submittedDecember 2018
dc.date.updated2019-04-10T21:20:37Z
dc.description.abstractSociomicrobiology has recently come to the forefront of bioanalytical research, primarily due to its physiological impact in the medical field. The interaction of bacterial cells in small, dense populations can reveal emergent properties of microbial communities, such as increased virulence and pathogenicity, as well as create a more accurate model for bacterial behavior in natural environments. Such systems are particularly relevant in mono- and polymicrobial communities, which exhibit social behaviors as well as the potential for symbiotic and/or adversarial interactions between species. The standard techniques for culturing bacteria lack the tools to provide adequate control over polymicrobial organization on a microscopic scale or to evaluate the spatiotemporal dynamics of bacterial interactions. Using our previously developed micro-3D printing platform, we can arrange cells in biocompatible, pico-liter sized containers, allowing us to overcome these prior spatial limitations. However, key questions still exist regarding the dynamics of interactions between distinct cellular populations. This dissertation focuses on the development of a modified micro-3D printing platform that enables us to fabricate protein-based structures around bacteria on the tip of a moveable substrate. Fabricating structures on moveable substrates such as a glass rod or optical fiber allows us to precisely tune where bacterial clusters are located in relation to varying stimuli and enables delivery of fabricated structures to remote environments such as chronic wounds. However, several challenges were faced in the development of this technique, such as optimization of fabrication solutions, successful layering of hydrogels of varying composition on glass rods, and creation of a custom-built fabrication setup for fabrication on optical fiber tips. Development of these techniques enables us to better appreciate the intricacies of sociomicrobial behavior and interactions, allowing for a better understanding of microbial responses leading to antibiotic resistance, and directing a better approach towards the treatment of various microbial infections.
dc.description.departmentChemistry
dc.format.mimetypeapplication/pdf
dc.identifier.urihttps://hdl.handle.net/2152/74235
dc.identifier.urihttp://dx.doi.org/10.26153/tsw/1365
dc.language.isoen
dc.subjectSociomicrobiology
dc.subjectHydrogel
dc.subjectOptical fiber
dc.subjectMultiphoton lithography
dc.subjectMicro 3D printing
dc.subjectPseudomonas aeruginosa
dc.subjectHydrogel characterization
dc.titleSolution characterization and fabrication of hydrogel microstructures on an optical fiber
dc.typeThesis
dc.type.materialtext
thesis.degree.departmentChemistry
thesis.degree.disciplineChemistry
thesis.degree.grantorThe University of Texas at Austin
thesis.degree.levelDoctoral
thesis.degree.nameDoctor of Philosophy

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